Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN03080610_01923 | Not Available | Positive | 2044974 - 2045756 | 27818.4 |
| glyoxylate reductase | SAMN03080610_01924 | Not Available | Negative | 2045794 - 2046792 | 36523.5 |
| sh3-like domain-containing protein | SAMN03080610_01925 | Not Available | Positive | 2046944 - 2047492 | 20261.3 |
| trehalose/maltose transport system permease protein | SAMN03080610_01926 | Not Available | Negative | 2047560 - 2048387 | 30143.0 |
| trehalose/maltose transport system permease protein | SAMN03080610_01927 | Not Available | Negative | 2048389 - 2049384 | 36718.1 |
| trehalose/maltose transport system substrate-binding protein | SAMN03080610_01928 | Not Available | Negative | 2049381 - 2050646 | 46455.6 |
| putative hemolysin | SAMN03080610_01929 | Not Available | Positive | 2050969 - 2052003 | 39087.3 |
| dna-nicking endonuclease, smr domain | SAMN03080610_01930 | Not Available | Negative | 2051904 - 2052602 | 25357.7 |
| membrane-bound lytic murein transglycosylase a | SAMN03080610_01931 | Not Available | Negative | 2052547 - 2053617 | 37782.8 |
| predicted lipid-binding transport protein, tim44 family | SAMN03080610_01932 | Not Available | Negative | 2053627 - 2054334 | 25942.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
