Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | SAMN03080610_01913 | Not Available | Positive | 2037102 - 2037695 | 21946.0 |
| protein of unknown function | SAMN03080610_01914 | Not Available | Positive | 2037698 - 2038222 | 19595.6 |
| glutamine amidotransferase | SAMN03080610_01915 | Not Available | Positive | 2038219 - 2038860 | 22684.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN03080610_01916 | Not Available | Positive | 2038868 - 2039602 | 25517.5 |
| diguanylate cyclase/phosphodiesterase | SAMN03080610_01917 | Not Available | Positive | 2039699 - 2041666 | 70483.5 |
| cyclase | SAMN03080610_01918 | Not Available | Positive | 2041827 - 2042618 | 27616.2 |
| phosphoribosyl-atp pyrophosphatase | SAMN03080610_01919 | Not Available | Positive | 2042615 - 2042953 | 11834.8 |
| pantothenate kinase | SAMN03080610_01920 | Not Available | Positive | 2042953 - 2043906 | 36035.3 |
| orotidine-5'-phosphate decarboxylase | SAMN03080610_01921 | Not Available | Positive | 2043909 - 2044646 | 25712.1 |
| uncharacterized conserved protein, duf1330 family | SAMN03080610_01922 | Not Available | Positive | 2044658 - 2044969 | 11326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
