Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN03080610_01903 | Not Available | Negative | 2025155 - 2026018 | 30502.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN03080610_01904 | Not Available | Positive | 2026169 - 2027341 | 39655.6 |
| uncharacterized membrane protein ycft | SAMN03080610_01905 | Not Available | Positive | 2027462 - 2028532 | 39461.0 |
| dna polymerase i | SAMN03080610_01906 | Not Available | Positive | 2028551 - 2031685 | 113646.0 |
| hypothetical protein | SAMN03080610_01907 | Not Available | Negative | 2031849 - 2032169 | 11122.0 |
| hypothetical protein | SAMN03080610_01908 | Not Available | Positive | 2032432 - 2033073 | 23500.0 |
| cysz protein | SAMN03080610_01909 | Not Available | Negative | 2033077 - 2033769 | 25042.5 |
| sugar or nucleoside kinase, ribokinase family | SAMN03080610_01910 | Not Available | Positive | 2033872 - 2034885 | 35216.9 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN03080610_01911 | Not Available | Negative | 2035038 - 2036348 | 48393.1 |
| atp-dependent hsluv protease, peptidase subunit hslv | SAMN03080610_01912 | Not Available | Negative | 2036345 - 2036911 | 20109.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
