Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_01893 | Not Available | Negative | 2014156 - 2016168 | 73237.6 |
| enoyl-[acyl-carrier-protein] reductase | SAMN03080610_01894 | Not Available | Negative | 2016330 - 2017169 | 30012.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-1 | SAMN03080610_01895 | Not Available | Negative | 2017169 - 2018395 | 43217.2 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | SAMN03080610_01896 | Not Available | Negative | 2018432 - 2018959 | 19429.7 |
| fur family transcriptional regulator, iron response regulator | SAMN03080610_01897 | Not Available | Positive | 2019156 - 2019584 | 16005.1 |
| alpha-glucoside transport system atp-binding protein | SAMN03080610_01898 | Not Available | Positive | 2019754 - 2020869 | 40567.0 |
| magnesium chelatase family protein | SAMN03080610_01899 | Not Available | Negative | 2021101 - 2022633 | 53002.5 |
| phop regulatory network protein yrbl | SAMN03080610_01900 | Not Available | Positive | 2022874 - 2023662 | 29820.9 |
| glutathione synthase | SAMN03080610_01901 | Not Available | Negative | 2023734 - 2024681 | 35227.5 |
| putative endonuclease | SAMN03080610_01902 | Not Available | Negative | 2024773 - 2025138 | 14011.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
