Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN03080610_00132 | Not Available | Positive | 149800 - 151797 | 70656.6 |
| peptide/nickel transport system atp-binding protein | SAMN03080610_00133 | Not Available | Positive | 151794 - 152783 | 36017.8 |
| hypothetical protein | SAMN03080610_00134 | Not Available | Positive | 152987 - 153316 | 11484.3 |
| cobalt/nickel transport protein | SAMN03080610_00135 | Not Available | Positive | 153339 - 154127 | 28212.4 |
| ferrous iron transport protein a | SAMN03080610_00136 | Not Available | Positive | 154285 - 154572 | 9950.12 |
| ferrous iron transport protein b | SAMN03080610_00137 | Not Available | Positive | 154565 - 157111 | 93102.4 |
| hypothetical protein | SAMN03080610_00138 | Not Available | Positive | 157125 - 157382 | 9075.97 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00139 | Not Available | Negative | 157401 - 158105 | 24599.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00140 | Not Available | Negative | 158222 - 159808 | 57133.9 |
| iron complex transport system atp-binding protein | SAMN03080610_00141 | Not Available | Negative | 159953 - 160738 | 28047.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
