Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03080610_01883 | Not Available | Positive | 2002742 - 2003092 | 12783.8 |
| ornithine cyclodeaminase | SAMN03080610_01884 | Not Available | Positive | 2003107 - 2004066 | 34944.9 |
| ribosome maturation factor rimp | SAMN03080610_01885 | Not Available | Positive | 2004247 - 2004801 | 19967.8 |
| nusa antitermination factor | SAMN03080610_01886 | Not Available | Positive | 2004897 - 2006507 | 60010.5 |
| hypothetical protein | SAMN03080610_01887 | Not Available | Positive | 2006567 - 2007196 | 22527.2 |
| translation initiation factor if-2 | SAMN03080610_01888 | Not Available | Positive | 2007209 - 2009839 | 94731.4 |
| ribosome-binding factor a | SAMN03080610_01889 | Not Available | Positive | 2009992 - 2010411 | 15538.4 |
| trna pseudouridine55 synthase | SAMN03080610_01890 | Not Available | Positive | 2010414 - 2011316 | 32529.8 |
| small subunit ribosomal protein s15 | SAMN03080610_01891 | Not Available | Positive | 2011481 - 2011750 | 10345.5 |
| polyribonucleotide nucleotidyltransferase | SAMN03080610_01892 | Not Available | Positive | 2011922 - 2014042 | 76335.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
