Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_01873 | Not Available | Positive | 1987934 - 1988101 | 5703.94 |
| methyl-accepting chemotaxis protein | SAMN03080610_01874 | Not Available | Positive | 1988200 - 1989549 | 47925.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN03080610_01875 | Not Available | Positive | 1989875 - 1992280 | 85502.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN03080610_01876 | Not Available | Negative | 1992431 - 1992922 | 18040.8 |
| tryptophanyl-trna synthetase | SAMN03080610_01877 | Not Available | Negative | 1992975 - 1994036 | 38687.3 |
| putative peptidoglycan lipid ii flippase | SAMN03080610_01878 | Not Available | Negative | 1994112 - 1995674 | 55805.9 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN03080610_01879 | Not Available | Negative | 1995736 - 1998555 | 105074.0 |
| dna mismatch repair protein muts | SAMN03080610_01880 | Not Available | Negative | 1998552 - 2001305 | 98769.2 |
| protease-4 | SAMN03080610_01881 | Not Available | Positive | 2001477 - 2002439 | 34011.5 |
| integration host factor subunit beta | SAMN03080610_01882 | Not Available | Positive | 2002450 - 2002737 | 10645.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
