Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, alpha chain | SAMN03080610_01862 | Not Available | Negative | 1979592 - 1980449 | 29651.4 |
| hypothetical protein | SAMN03080610_01863 | Not Available | Negative | 1980439 - 1980684 | 9522.98 |
| tryptophan synthase beta chain | SAMN03080610_01864 | Not Available | Negative | 1980694 - 1981926 | 44683.2 |
| phosphoribosylanthranilate isomerase | SAMN03080610_01865 | Not Available | Negative | 1981972 - 1982742 | 26972.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03080610_01866 | Not Available | Negative | 1982742 - 1983554 | 29616.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_01867 | Not Available | Positive | 1983651 - 1984814 | 41625.9 |
| translation initiation factor if-3 | SAMN03080610_01868 | Not Available | Positive | 1985004 - 1985729 | 27325.1 |
| lsu ribosomal protein l35p | SAMN03080610_01870 | Not Available | Positive | 1986096 - 1986296 | 7461.5 |
| large subunit ribosomal protein l20 | SAMN03080610_01871 | Not Available | Positive | 1986309 - 1986710 | 15077.3 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN03080610_01872 | Not Available | Positive | 1986852 - 1987934 | 40525.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
