Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN03080610_01842 | Not Available | Negative | 1952788 - 1953945 | 42302.0 |
| xtp/ditp diphosphohydrolase | SAMN03080610_01843 | Not Available | Negative | 1953952 - 1954602 | 22921.2 |
| rnase ph | SAMN03080610_01844 | Not Available | Negative | 1954602 - 1955315 | 25808.0 |
| heat-inducible transcription repressor hrca | SAMN03080610_01845 | Not Available | Positive | 1955446 - 1956507 | 38944.9 |
| molecular chaperone grpe | SAMN03080610_01846 | Not Available | Positive | 1956615 - 1957298 | 24621.8 |
| orotate phosphoribosyltransferase | SAMN03080610_01847 | Not Available | Positive | 1957488 - 1958051 | 19585.6 |
| alkylated dna repair protein (dna oxidative demethylase) | SAMN03080610_01848 | Not Available | Negative | 1958070 - 1958687 | 22506.1 |
| molecular chaperone dnak | SAMN03080610_01849 | Not Available | Positive | 1958973 - 1960910 | 69339.8 |
| molecular chaperone dnaj | SAMN03080610_01850 | Not Available | Positive | 1961261 - 1962400 | 41365.5 |
| phosphatidylethanolamine/phosphatidyl-n- methylethanolamine n-methyltransferase | SAMN03080610_01851 | Not Available | Positive | 1962480 - 1963076 | 22487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
