Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-coa/methylmalonyl-coa synthetase | SAMN03080610_01822 | Not Available | Negative | 1930141 - 1931727 | 57006.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN03080610_01823 | Not Available | Negative | 1931785 - 1932879 | 37929.2 |
| apolipoprotein n-acyltransferase | SAMN03080610_01824 | Not Available | Positive | 1933079 - 1934701 | 58319.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN03080610_01825 | Not Available | Positive | 1934796 - 1935224 | 16014.0 |
| hypothetical protein | SAMN03080610_01826 | Not Available | Negative | 1935302 - 1936057 | 28478.3 |
| protein of unknown function | SAMN03080610_01827 | Not Available | Negative | 1936261 - 1936692 | 16820.1 |
| poly(3-hydroxybutyrate) depolymerase | SAMN03080610_01828 | Not Available | Negative | 1936866 - 1938509 | 61217.2 |
| abc-2 type transport system permease protein | SAMN03080610_01829 | Not Available | Negative | 1938587 - 1939522 | 34267.9 |
| pyrroline-5-carboxylate reductase | SAMN03080610_01830 | Not Available | Positive | 1939613 - 1940380 | 26489.8 |
| abc-2 type transport system atp-binding protein | SAMN03080610_01831 | Not Available | Negative | 1940396 - 1941151 | 27415.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
