Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/proline transport system substrate-binding protein | SAMN03080610_01802 | Not Available | Negative | 1896415 - 1897437 | 37206.3 |
| glycine betaine/proline transport system permease protein | SAMN03080610_01803 | Not Available | Negative | 1897530 - 1898717 | 41162.9 |
| glycine betaine/proline transport system atp-binding protein | SAMN03080610_01804 | Not Available | Negative | 1898710 - 1899915 | 43546.2 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN03080610_01805 | Not Available | Negative | 1900150 - 1900623 | 16285.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03080610_01806 | Not Available | Positive | 1900853 - 1901740 | 33175.1 |
| phosphoglucomutase | SAMN03080610_01807 | Not Available | Negative | 1901784 - 1903415 | 57336.0 |
| starch synthase | SAMN03080610_01808 | Not Available | Negative | 1903412 - 1904887 | 53447.1 |
| glucose-1-phosphate adenylyltransferase | SAMN03080610_01809 | Not Available | Negative | 1904896 - 1906176 | 47348.3 |
| 4-alpha-glucanotransferase | SAMN03080610_01810 | Not Available | Negative | 1906319 - 1908151 | 67735.0 |
| glycogen operon protein | SAMN03080610_01811 | Not Available | Negative | 1908209 - 1910284 | 78043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
