Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine n-acetyltransferase | SAMN03080610_01792 | Not Available | Negative | 1888023 - 1888502 | 18050.7 |
| glycoprotease family protein | SAMN03080610_01793 | Not Available | Negative | 1888499 - 1889218 | 24778.0 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN03080610_01794 | Not Available | Negative | 1889281 - 1889835 | 20032.7 |
| predicted o-methyltransferase yrrm | SAMN03080610_01795 | Not Available | Negative | 1889976 - 1890641 | 23630.4 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN03080610_01796 | Not Available | Negative | 1890720 - 1891613 | 32626.2 |
| uncharacterized membrane protein | SAMN03080610_01797 | Not Available | Negative | 1891689 - 1892222 | 19531.5 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN03080610_01798 | Not Available | Positive | 1892245 - 1892958 | 25879.6 |
| cysteine synthase a | SAMN03080610_01799 | Not Available | Negative | 1893117 - 1894109 | 34945.2 |
| hypothetical protein | SAMN03080610_01800 | Not Available | Negative | 1894315 - 1894773 | 15771.1 |
| cyclomaltodextrinase | SAMN03080610_01801 | Not Available | Negative | 1894904 - 1896229 | 49197.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
