Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN03080610_01772 | Not Available | Negative | 1868395 - 1869897 | 54659.0 |
| lipopolysaccharide export system atp-binding protein | SAMN03080610_01773 | Not Available | Negative | 1870019 - 1870933 | 32957.4 |
| lipopolysaccharide export system protein lpta | SAMN03080610_01774 | Not Available | Negative | 1870947 - 1871558 | 20981.5 |
| lipopolysaccharide export system protein lptc | SAMN03080610_01775 | Not Available | Negative | 1871570 - 1872259 | 24351.9 |
| ribonuclease d | SAMN03080610_01776 | Not Available | Negative | 1872335 - 1872949 | 22927.3 |
| uncharacterized conserved protein | SAMN03080610_01777 | Not Available | Positive | 1873450 - 1873794 | 12480.9 |
| protein-disulfide isomerase | SAMN03080610_01778 | Not Available | Negative | 1873840 - 1874448 | 21837.1 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN03080610_01779 | Not Available | Negative | 1874450 - 1875211 | 27345.9 |
| h+-transporting atpase | SAMN03080610_01780 | Not Available | Negative | 1875451 - 1877943 | 89179.5 |
| transcriptional regulator, xre family with cupin sensor | SAMN03080610_01781 | Not Available | Negative | 1878244 - 1878864 | 22674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
