Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_01762 | Not Available | Positive | 1859978 - 1860478 | 18339.0 |
| two-component system, response regulator rega | SAMN03080610_01763 | Not Available | Negative | 1860543 - 1861100 | 20759.8 |
| two-component system, sensor histidine kinase regb | SAMN03080610_01764 | Not Available | Negative | 1861188 - 1862552 | 49352.8 |
| dihydrodipicolinate reductase | SAMN03080610_01765 | Not Available | Positive | 1862869 - 1863678 | 28119.6 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN03080610_01766 | Not Available | Positive | 1863707 - 1864339 | 23432.2 |
| hemerythrin hhe cation binding domain-containing protein | SAMN03080610_01767 | Not Available | Positive | 1864336 - 1864935 | 22660.0 |
| hypothetical protein | SAMN03080610_01768 | Not Available | Negative | 1865033 - 1865179 | 5605.81 |
| predicted oxidoreductase | SAMN03080610_01769 | Not Available | Negative | 1865417 - 1866286 | 31228.5 |
| rubrerythrin | SAMN03080610_01770 | Not Available | Negative | 1866393 - 1867370 | 35510.7 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN03080610_01771 | Not Available | Positive | 1867487 - 1868329 | 32141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
