Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily c | SAMN03080610_01732 | Not Available | Negative | 1828039 - 1829811 | 63613.0 |
| methyltransferase domain-containing protein | SAMN03080610_01733 | Not Available | Positive | 1830142 - 1831293 | 42409.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN03080610_01734 | Not Available | Positive | 1831295 - 1832392 | 41240.4 |
| glycosyl transferase family 2 | SAMN03080610_01735 | Not Available | Positive | 1832728 - 1833675 | 34842.4 |
| lipopolysaccharide transport system permease protein | SAMN03080610_01736 | Not Available | Positive | 1833763 - 1834545 | 29389.8 |
| lipopolysaccharide transport system atp-binding protein | SAMN03080610_01737 | Not Available | Positive | 1834545 - 1835264 | 25915.5 |
| iron(iii) transport system atp-binding protein | SAMN03080610_01738 | Not Available | Positive | 1835518 - 1836630 | 40265.0 |
| iron(iii) transport system substrate-binding protein | SAMN03080610_01739 | Not Available | Positive | 1836888 - 1837910 | 36531.8 |
| iron(iii) transport system permease protein | SAMN03080610_01740 | Not Available | Positive | 1837943 - 1839700 | 62612.5 |
| chloramphenicol o-acetyltransferase type b | SAMN03080610_01741 | Not Available | Negative | 1839853 - 1840491 | 23245.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
