Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN03080610_01712 | Not Available | Positive | 1800754 - 1801308 | 20751.6 |
| dtdp-glucose 4,6-dehydratase | SAMN03080610_01713 | Not Available | Positive | 1801327 - 1802403 | 40213.2 |
| dtdp-4-dehydrorhamnose reductase | SAMN03080610_01714 | Not Available | Positive | 1802400 - 1803302 | 31829.4 |
| glycosyltransferase, gt2 family | SAMN03080610_01715 | Not Available | Positive | 1803369 - 1805588 | 83976.6 |
| hypothetical protein | SAMN03080610_01716 | Not Available | Positive | 1805597 - 1806436 | 32464.9 |
| sulfotransferase family protein | SAMN03080610_01717 | Not Available | Positive | 1806598 - 1807311 | 27161.0 |
| peptidase family m23 | SAMN03080610_01718 | Not Available | Positive | 1807435 - 1808514 | 38562.0 |
| methyltransferase, fkbm family | SAMN03080610_01719 | Not Available | Positive | 1808812 - 1809498 | 25006.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_01720 | Not Available | Positive | 1809646 - 1810872 | 46870.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_01721 | Not Available | Positive | 1810974 - 1813940 | 111752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
