Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase cpaa | SAMN03080610_01702 | Not Available | Negative | 1791594 - 1792109 | 18578.4 |
| pilus assembly protein flp/pila | SAMN03080610_01703 | Not Available | Negative | 1792238 - 1792408 | 5733.12 |
| pilus formation protein n terminal region | SAMN03080610_01704 | Not Available | Positive | 1792657 - 1793253 | 21422.7 |
| large conductance mechanosensitive channel | SAMN03080610_01705 | Not Available | Positive | 1793414 - 1793866 | 16399.4 |
| aspartate/methionine/tyrosine aminotransferase | SAMN03080610_01706 | Not Available | Positive | 1793893 - 1795119 | 44689.2 |
| hypothetical protein | SAMN03080610_01707 | Not Available | Positive | 1795116 - 1796246 | 39043.7 |
| 5-aminolevulinate synthase | SAMN03080610_01708 | Not Available | Negative | 1796403 - 1797674 | 46434.6 |
| beta-alanine--pyruvate transaminase | SAMN03080610_01709 | Not Available | Negative | 1797880 - 1799217 | 48655.2 |
| protein of unknown function | SAMN03080610_01710 | Not Available | Positive | 1799502 - 1799645 | 5051.67 |
| glucose-1-phosphate thymidylyltransferase | SAMN03080610_01711 | Not Available | Positive | 1799879 - 1800757 | 32090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
