Afifella marina DSM 2698

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Afifellaceae

Genus

Afifella

Description

Afifella marina DSM 2698 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is significant as it suggests a specific niche within the microbial community where this organism can survive and proliferate. The bacterium has a single replicon, which is characteristic of certain prokaryotic organisms and can influence its genetic stability and replication processes. The accession number for Afifella marina DSM 2698 is FMVW00000000.1, which serves as a reference for genomic data associated with this strain. This information is essential for researchers looking to explore its genetic makeup and potential functions further. Understanding the anaerobic nature of Afifella marina DSM 2698 provides insights into its ecological role. Such organisms often contribute to biogeochemical cycles, particularly in marine environments where anoxic conditions prevail. Their metabolic processes can impact nutrient cycling and the overall health of the ecosystem, highlighting the importance of studying anaerobic bacteria within diverse habitats. The presence of Afifella marina DSM 2698 in such ecosystems may offer opportunities to explore its potential applications in biotechnology, particularly in processes that require anaerobic conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAfifellaceae
GenusAfifella
SpeciesAfifella marina
StrainDSM 2698

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afifella marina DSM 2698 genome assembly, contig:

Gene Summary

Adenine Count

721670 bp

Thymine Count

734935 bp

Guanine Count

1271881 bp

Cytosine Count

1234935 bp

Genome Length

3963421 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin peptidase cpaaSAMN03080610_01702Not AvailableNegative1791594 - 179210918578.4
pilus assembly protein flp/pilaSAMN03080610_01703Not AvailableNegative1792238 - 17924085733.12
pilus formation protein n terminal regionSAMN03080610_01704Not AvailablePositive1792657 - 179325321422.7
large conductance mechanosensitive channelSAMN03080610_01705Not AvailablePositive1793414 - 179386616399.4
aspartate/methionine/tyrosine aminotransferaseSAMN03080610_01706Not AvailablePositive1793893 - 179511944689.2
hypothetical proteinSAMN03080610_01707Not AvailablePositive1795116 - 179624639043.7
5-aminolevulinate synthaseSAMN03080610_01708Not AvailableNegative1796403 - 179767446434.6
beta-alanine--pyruvate transaminaseSAMN03080610_01709Not AvailableNegative1797880 - 179921748655.2
protein of unknown functionSAMN03080610_01710Not AvailablePositive1799502 - 17996455051.67
glucose-1-phosphate thymidylyltransferaseSAMN03080610_01711Not AvailablePositive1799879 - 180075732090.4

Displaying genes 1701 – 1710 of 3724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.