Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family protein | SAMN03080610_01692 | Not Available | Negative | 1780725 - 1781072 | 12912.0 |
| leucyl aminopeptidase | SAMN03080610_01693 | Not Available | Negative | 1781094 - 1782497 | 49572.2 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN03080610_01694 | Not Available | Positive | 1782655 - 1783464 | 28885.3 |
| tight adherence protein c | SAMN03080610_01695 | Not Available | Negative | 1783550 - 1784515 | 35575.9 |
| tight adherence protein b | SAMN03080610_01696 | Not Available | Negative | 1784525 - 1785517 | 35936.0 |
| pilus assembly protein cpaf | SAMN03080610_01697 | Not Available | Negative | 1785564 - 1787039 | 54298.4 |
| pilus assembly protein cpae | SAMN03080610_01698 | Not Available | Negative | 1787055 - 1788356 | 46772.0 |
| pilus assembly protein cpad | SAMN03080610_01699 | Not Available | Negative | 1788364 - 1789068 | 24950.6 |
| pilus assembly protein cpac | SAMN03080610_01700 | Not Available | Negative | 1789090 - 1790607 | 52397.5 |
| pilus assembly protein cpab | SAMN03080610_01701 | Not Available | Negative | 1790640 - 1791419 | 27376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
