Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein imua | SAMN03080610_00112 | Not Available | Negative | 121167 - 122072 | 31648.7 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN03080610_00113 | Not Available | Positive | 122372 - 124159 | 65763.4 |
| outer membrane autotransporter barrel domain-containing protein | SAMN03080610_00114 | Not Available | Negative | 124240 - 127956 | 121801.0 |
| dna-binding transcriptional regulator, padr family | SAMN03080610_00115 | Not Available | Positive | 128094 - 128996 | 32545.8 |
| spermidine synthase | SAMN03080610_00116 | Not Available | Positive | 129095 - 129814 | 25579.8 |
| di-and tricarboxylate transporter | SAMN03080610_00117 | Not Available | Positive | 129986 - 131812 | 64226.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00118 | Not Available | Negative | 131819 - 132634 | 29189.2 |
| potassium and/or sodium efflux p-type atpase | SAMN03080610_00119 | Not Available | Positive | 132929 - 135676 | 97638.8 |
| hth-type transcriptional regulator / antitoxin higa | SAMN03080610_00120 | Not Available | Negative | 135741 - 136964 | 45887.8 |
| mrna interferase higb | SAMN03080610_00121 | Not Available | Negative | 136967 - 137260 | 11313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
