Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system permease protein | SAMN03080610_01682 | Not Available | Positive | 1772541 - 1773674 | 41904.1 |
| microcin c transport system permease protein | SAMN03080610_01683 | Not Available | Positive | 1773678 - 1774949 | 46924.1 |
| hypothetical protein | SAMN03080610_01684 | Not Available | Positive | 1774998 - 1775246 | 8878.56 |
| uncharacterized protein, contains pin domain | SAMN03080610_01685 | Not Available | Positive | 1775243 - 1775632 | 13794.3 |
| hypothetical protein | SAMN03080610_01686 | Not Available | Positive | 1775705 - 1775941 | 9049.49 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN03080610_01687 | Not Available | Positive | 1775938 - 1776378 | 16400.5 |
| microcin c transport system atp-binding protein | SAMN03080610_01688 | Not Available | Positive | 1776375 - 1778003 | 60047.7 |
| glyoxylate/hydroxypyruvate reductase a | SAMN03080610_01689 | Not Available | Positive | 1778000 - 1778965 | 34928.4 |
| methyltransferase, fkbm family | SAMN03080610_01690 | Not Available | Negative | 1778932 - 1779798 | 31731.4 |
| cell wall-associated hydrolase, nlpc family | SAMN03080610_01691 | Not Available | Negative | 1779859 - 1780728 | 31326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
