Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yhah, duf805 family | SAMN03080610_01672 | Not Available | Negative | 1762073 - 1762411 | 12708.7 |
| uncharacterized membrane protein yhah, duf805 family | SAMN03080610_01673 | Not Available | Negative | 1762424 - 1762789 | 13156.2 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN03080610_01674 | Not Available | Negative | 1762817 - 1763665 | 29752.5 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN03080610_01675 | Not Available | Positive | 1763828 - 1764247 | 15337.5 |
| nad+ diphosphatase | SAMN03080610_01676 | Not Available | Positive | 1764255 - 1765211 | 34928.4 |
| prephenate dehydratase | SAMN03080610_01677 | Not Available | Negative | 1765252 - 1766148 | 32247.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN03080610_01678 | Not Available | Negative | 1766145 - 1766882 | 26417.9 |
| cytochrome c2 | SAMN03080610_01679 | Not Available | Positive | 1767042 - 1768562 | 52617.8 |
| microcin c transport system substrate-binding protein | SAMN03080610_01680 | Not Available | Positive | 1768733 - 1770628 | 72441.5 |
| microcin c transport system substrate-binding protein | SAMN03080610_01681 | Not Available | Positive | 1770625 - 1772511 | 70536.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
