Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine-d-alanine ligase | SAMN03080610_01662 | Not Available | Positive | 1752692 - 1753768 | 37600.1 |
| hypothetical protein | SAMN03080610_01663 | Not Available | Negative | 1753878 - 1754444 | 20442.1 |
| dna recombination protein rmuc | SAMN03080610_01664 | Not Available | Negative | 1754836 - 1756011 | 43173.9 |
| peptide deformylase | SAMN03080610_01665 | Not Available | Positive | 1756098 - 1756631 | 20124.3 |
| methionyl-trna formyltransferase | SAMN03080610_01666 | Not Available | Positive | 1756662 - 1757591 | 32953.9 |
| trna pseudouridine38-40 synthase | SAMN03080610_01667 | Not Available | Positive | 1757630 - 1758382 | 27717.0 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01668 | Not Available | Positive | 1758408 - 1759286 | 31893.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_01669 | Not Available | Positive | 1759376 - 1760242 | 30887.0 |
| hypothetical protein | SAMN03080610_01670 | Not Available | Negative | 1760323 - 1760913 | 21376.1 |
| succinyldiaminopimelate desuccinylase | SAMN03080610_01671 | Not Available | Negative | 1760910 - 1762076 | 41539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
