Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN03080610_01611 | Not Available | Negative | 1697514 - 1698839 | 46444.1 |
| aldehyde dehydrogenase (nad+) | SAMN03080610_01612 | Not Available | Positive | 1698997 - 1700463 | 52916.1 |
| 4-carboxymuconolactone decarboxylase | SAMN03080610_01613 | Not Available | Positive | 1700836 - 1701216 | 13999.9 |
| predicted oxidoreductase | SAMN03080610_01614 | Not Available | Negative | 1701367 - 1702404 | 37739.0 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN03080610_01615 | Not Available | Negative | 1702416 - 1703597 | 40201.1 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01616 | Not Available | Positive | 1703703 - 1704608 | 32394.1 |
| hypothetical protein | SAMN03080610_01617 | Not Available | Positive | 1704888 - 1705370 | 17781.8 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN03080610_01618 | Not Available | Positive | 1705367 - 1706647 | 49946.4 |
| type iv secretion system protein vird4 | SAMN03080610_01619 | Not Available | Positive | 1706737 - 1708509 | 64487.3 |
| hypothetical protein | SAMN03080610_01620 | Not Available | Positive | 1708568 - 1708867 | 10887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
