Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine ammonia-lyase | SAMN03080610_01571 | Not Available | Positive | 1649942 - 1650931 | 34311.3 |
| hypothetical protein | SAMN03080610_01572 | Not Available | Negative | 1650928 - 1651356 | 15733.6 |
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN03080610_01573 | Not Available | Positive | 1651401 - 1652582 | 41141.8 |
| l-alanine-dl-glutamate epimerase | SAMN03080610_01574 | Not Available | Negative | 1652610 - 1653584 | 34930.8 |
| uncharacterized conserved protein, nad-dependent epimerase/dehydratase family | SAMN03080610_01575 | Not Available | Negative | 1653581 - 1654588 | 35704.9 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN03080610_01576 | Not Available | Positive | 1654713 - 1655840 | 40755.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN03080610_01577 | Not Available | Positive | 1655848 - 1656669 | 29514.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN03080610_01578 | Not Available | Positive | 1656672 - 1658534 | 65786.1 |
| cholesterol transport system auxiliary component | SAMN03080610_01579 | Not Available | Positive | 1658534 - 1659217 | 23912.0 |
| methionine aminopeptidase, type i | SAMN03080610_01580 | Not Available | Positive | 1659298 - 1660047 | 26758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
