Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_01550 | Not Available | Positive | 1631482 - 1631616 | 4922.94 |
| hypothetical protein | SAMN03080610_01551 | Not Available | Positive | 1631940 - 1632161 | 8325.64 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03080610_01552 | Not Available | Positive | 1632173 - 1632721 | 20127.7 |
| general stress protein 26 | SAMN03080610_01553 | Not Available | Negative | 1632811 - 1633290 | 17979.1 |
| dna topoisomerase-1 | SAMN03080610_01554 | Not Available | Negative | 1633319 - 1634383 | 40425.5 |
| eama domain-containing membrane protein rard | SAMN03080610_01555 | Not Available | Negative | 1634512 - 1635465 | 33889.8 |
| carbon-monoxide dehydrogenase large subunit | SAMN03080610_01556 | Not Available | Positive | 1635584 - 1637905 | 82627.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN03080610_01557 | Not Available | Positive | 1637969 - 1638895 | 33485.1 |
| transcriptional regulator, asnc family | SAMN03080610_01558 | Not Available | Negative | 1638907 - 1639143 | 8706.38 |
| hydroxyethylthiazole kinase | SAMN03080610_01560 | Not Available | Positive | 1639408 - 1640229 | 27802.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
