Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_01490 | Not Available | Negative | 1576188 - 1577588 | 51106.1 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN03080610_01491 | Not Available | Positive | 1577750 - 1578151 | 14206.3 |
| acetolactate synthase, large subunit | SAMN03080610_01492 | Not Available | Positive | 1578359 - 1580116 | 64046.9 |
| acetolactate synthase, small subunit | SAMN03080610_01493 | Not Available | Positive | 1580258 - 1580854 | 21794.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_01494 | Not Available | Positive | 1580914 - 1581507 | 21045.4 |
| hypothetical protein | SAMN03080610_01495 | Not Available | Positive | 1581619 - 1582068 | 15672.5 |
| exodeoxyribonuclease-5 | SAMN03080610_01496 | Not Available | Positive | 1582212 - 1583348 | 41706.6 |
| hypothetical protein | SAMN03080610_01497 | Not Available | Negative | 1583413 - 1583655 | 8473.33 |
| subtilase family protein | SAMN03080610_01498 | Not Available | Negative | 1583726 - 1584967 | 42875.6 |
| hypothetical protein | SAMN03080610_01499 | Not Available | Negative | 1585087 - 1585236 | 6049.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
