Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03080610_01480 | Not Available | Positive | 1567479 - 1568072 | 21495.7 |
| thymidylate synthase | SAMN03080610_01481 | Not Available | Positive | 1568161 - 1568955 | 29939.7 |
| dihydrofolate reductase | SAMN03080610_01482 | Not Available | Positive | 1568952 - 1569464 | 18560.1 |
| membrane protease subunit hflk | SAMN03080610_01483 | Not Available | Positive | 1569688 - 1570830 | 41895.9 |
| membrane protease subunit hflc | SAMN03080610_01484 | Not Available | Positive | 1570827 - 1572020 | 42979.2 |
| hypothetical protein | SAMN03080610_01485 | Not Available | Positive | 1572017 - 1572202 | 6418.95 |
| serine protease do | SAMN03080610_01486 | Not Available | Positive | 1572247 - 1573767 | 53516.8 |
| protein n-acetyltransferase, rimj/riml family | SAMN03080610_01487 | Not Available | Negative | 1573770 - 1574336 | 21724.6 |
| phosphoserine phosphatase | SAMN03080610_01488 | Not Available | Negative | 1574333 - 1575247 | 32120.9 |
| trna dimethylallyltransferase | SAMN03080610_01489 | Not Available | Positive | 1575285 - 1576160 | 32197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
