Afifella marina DSM 2698

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Afifellaceae

Genus

Afifella

Description

Afifella marina DSM 2698 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is significant as it suggests a specific niche within the microbial community where this organism can survive and proliferate. The bacterium has a single replicon, which is characteristic of certain prokaryotic organisms and can influence its genetic stability and replication processes. The accession number for Afifella marina DSM 2698 is FMVW00000000.1, which serves as a reference for genomic data associated with this strain. This information is essential for researchers looking to explore its genetic makeup and potential functions further. Understanding the anaerobic nature of Afifella marina DSM 2698 provides insights into its ecological role. Such organisms often contribute to biogeochemical cycles, particularly in marine environments where anoxic conditions prevail. Their metabolic processes can impact nutrient cycling and the overall health of the ecosystem, highlighting the importance of studying anaerobic bacteria within diverse habitats. The presence of Afifella marina DSM 2698 in such ecosystems may offer opportunities to explore its potential applications in biotechnology, particularly in processes that require anaerobic conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAfifellaceae
GenusAfifella
SpeciesAfifella marina
StrainDSM 2698

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afifella marina DSM 2698 genome assembly, contig:

Gene Summary

Adenine Count

721670 bp

Thymine Count

734935 bp

Guanine Count

1271881 bp

Cytosine Count

1234935 bp

Genome Length

3963421 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-lactate dehydrogenase (cytochrome)SAMN03080610_01470Not AvailablePositive1555338 - 155674149824.5
asma family proteinSAMN03080610_01471Not AvailablePositive1556830 - 1560645132080.0
ribbon-helix-helix domain-containing proteinSAMN03080610_01472Not AvailableNegative1560649 - 15608677892.63
hypothetical proteinSAMN03080610_01473Not AvailableNegative1560899 - 156169327704.5
protein of unknown functionSAMN03080610_01474Not AvailableNegative1561701 - 15619017655.97
fumarase, class iiSAMN03080610_01475Not AvailableNegative1561912 - 156330649984.5
hypothetical proteinSAMN03080610_01476Not AvailableNegative1563418 - 156399621176.1
Tmrna,resume consensus sequence (at 236): tgtagttgcgaatgacaaNot AvailableNot AvailablePositive1564083 - 1564454Not Available
rhomboid family glygly-cterm serine proteaseSAMN03080610_01478Not AvailableNegative1564549 - 156519022419.4
ca-activated chloride channel family proteinSAMN03080610_01479Not AvailableNegative1565190 - 156730176360.4

Displaying genes 1471 – 1480 of 3724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.