Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase (cytochrome) | SAMN03080610_01470 | Not Available | Positive | 1555338 - 1556741 | 49824.5 |
| asma family protein | SAMN03080610_01471 | Not Available | Positive | 1556830 - 1560645 | 132080.0 |
| ribbon-helix-helix domain-containing protein | SAMN03080610_01472 | Not Available | Negative | 1560649 - 1560867 | 7892.63 |
| hypothetical protein | SAMN03080610_01473 | Not Available | Negative | 1560899 - 1561693 | 27704.5 |
| protein of unknown function | SAMN03080610_01474 | Not Available | Negative | 1561701 - 1561901 | 7655.97 |
| fumarase, class ii | SAMN03080610_01475 | Not Available | Negative | 1561912 - 1563306 | 49984.5 |
| hypothetical protein | SAMN03080610_01476 | Not Available | Negative | 1563418 - 1563996 | 21176.1 |
| Tmrna,resume consensus sequence (at 236): tgtagttgcgaatgacaa | Not Available | Not Available | Positive | 1564083 - 1564454 | Not Available |
| rhomboid family glygly-cterm serine protease | SAMN03080610_01478 | Not Available | Negative | 1564549 - 1565190 | 22419.4 |
| ca-activated chloride channel family protein | SAMN03080610_01479 | Not Available | Negative | 1565190 - 1567301 | 76360.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
