Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase (atp-hydrolysing) | SAMN03080610_01429 | Not Available | Negative | 1505438 - 1509307 | 138226.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN03080610_01430 | Not Available | Positive | 1509461 - 1510432 | 35137.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN03080610_01431 | Not Available | Positive | 1510490 - 1511047 | 19621.5 |
| trap transporter, dctm subunit | SAMN03080610_01432 | Not Available | Positive | 1511047 - 1512351 | 45417.8 |
| predicted transcription regulator, contains hth domain, marr family | SAMN03080610_01433 | Not Available | Positive | 1512355 - 1512885 | 18980.1 |
| transglycosylase slt domain-containing protein | SAMN03080610_01435 | Not Available | Negative | 1513387 - 1514088 | 23981.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN03080610_01436 | Not Available | Negative | 1514218 - 1514976 | 27752.9 |
| dnaj like chaperone protein | SAMN03080610_01437 | Not Available | Negative | 1514973 - 1515689 | 26690.6 |
| mraz protein | SAMN03080610_01438 | Not Available | Positive | 1516305 - 1516772 | 17512.7 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN03080610_01439 | Not Available | Positive | 1516772 - 1517794 | 36234.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
