Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | SAMN03080610_01419 | Not Available | Negative | 1498631 - 1499812 | 43428.0 |
| hypothetical protein | SAMN03080610_01420 | Not Available | Negative | 1499975 - 1500355 | 13678.0 |
| methylenetetrahydrofolate reductase (nadph) | SAMN03080610_01421 | Not Available | Negative | 1500775 - 1501668 | 32438.3 |
| arsr family transcriptional regulator | SAMN03080610_01422 | Not Available | Negative | 1501665 - 1502675 | 37546.1 |
| pp_01411 | SAMN03080610_01423 | Not Available | Positive | 1502864 - 1503442 | Not Available |
| cold-shock dna-binding protein family | SAMN03080610_01424 | Not Available | Positive | 1503704 - 1503907 | 7478.82 |
| ktsc domain-containing protein | SAMN03080610_01425 | Not Available | Positive | 1504039 - 1504284 | 9298.14 |
| protein of unknown function | SAMN03080610_01426 | Not Available | Negative | 1504291 - 1504491 | 7502.57 |
| peptide-methionine (r)-s-oxide reductase | SAMN03080610_01427 | Not Available | Negative | 1504521 - 1504973 | 17047.9 |
| hypothetical protein | SAMN03080610_01428 | Not Available | Positive | 1505194 - 1505376 | 5676.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
