Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | SAMN03080610_01389 | Not Available | Negative | 1464053 - 1466017 | 72115.8 |
| dimethylargininase | SAMN03080610_01390 | Not Available | Positive | 1466040 - 1466819 | 28043.7 |
| agmatinase | SAMN03080610_01391 | Not Available | Negative | 1466832 - 1467785 | 34176.3 |
| hypothetical protein | SAMN03080610_01392 | Not Available | Negative | 1468025 - 1468264 | 8761.92 |
| small subunit ribosomal protein s9 | SAMN03080610_01393 | Not Available | Negative | 1468379 - 1468858 | 17662.2 |
| lsu ribosomal protein l13p | SAMN03080610_01394 | Not Available | Negative | 1468859 - 1469323 | 17315.1 |
| uncharacterized domain 1-containing protein | SAMN03080610_01395 | Not Available | Negative | 1469499 - 1469936 | 15326.7 |
| hypothetical protein | SAMN03080610_01396 | Not Available | Positive | 1470126 - 1470554 | 15673.0 |
| acetyltransferase (gnat) family protein | SAMN03080610_01397 | Not Available | Negative | 1470574 - 1471098 | 19020.0 |
| o-acetylhomoserine (thiol)-lyase | SAMN03080610_01398 | Not Available | Positive | 1471204 - 1472493 | 46063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
