Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00082 | Not Available | Positive | 86879 - 87784 | 32131.2 |
| gamma-glutamyltransferase 1 threonine peptidase. merops family t03 | SAMN03080610_00083 | Not Available | Positive | 87792 - 89573 | 62661.4 |
| putative thiamine transport system substrate-binding protein | SAMN03080610_00084 | Not Available | Positive | 89764 - 90975 | 44562.6 |
| putative thiamine transport system permease protein | SAMN03080610_00085 | Not Available | Positive | 90945 - 92693 | 61753.5 |
| putative thiamine transport system atp-binding protein | SAMN03080610_00086 | Not Available | Positive | 92690 - 93355 | 23517.5 |
| atp-dependent helicase hrpb | SAMN03080610_00087 | Not Available | Positive | 93352 - 95811 | 88166.8 |
| glucokinase | SAMN03080610_00088 | Not Available | Negative | 95828 - 96853 | 36178.6 |
| nucleoside-binding protein | SAMN03080610_00089 | Not Available | Positive | 96970 - 97992 | 36500.1 |
| uncharacterized conserved protein, duf433 family | SAMN03080610_00090 | Not Available | Positive | 98059 - 98769 | 26274.4 |
| hypothetical protein | SAMN03080610_00091 | Not Available | Positive | 98766 - 99167 | 15407.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
