Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease protein | SAMN03080610_01379 | Not Available | Negative | 1452827 - 1454041 | 44157.6 |
| leucyl aminopeptidase | SAMN03080610_01380 | Not Available | Positive | 1454214 - 1455707 | 52149.4 |
| dna polymerase iii, chi subunit | SAMN03080610_01381 | Not Available | Positive | 1455737 - 1456186 | 17133.0 |
| chad domain-containing protein | SAMN03080610_01382 | Not Available | Negative | 1456216 - 1457199 | 37364.2 |
| adenylate cyclase | SAMN03080610_01383 | Not Available | Negative | 1457215 - 1457685 | 18107.1 |
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN03080610_01384 | Not Available | Negative | 1457748 - 1458662 | 32570.1 |
| l-lysine exporter family protein lyse/argo | SAMN03080610_01385 | Not Available | Positive | 1458759 - 1459367 | 20964.9 |
| hypothetical protein | SAMN03080610_01386 | Not Available | Negative | 1459497 - 1459775 | 9702.61 |
| decaheme-associated outer membrane protein, mtrb/piob family | SAMN03080610_01387 | Not Available | Negative | 1459849 - 1462167 | 86009.9 |
| decaheme c-type cytochrome, dmse family | SAMN03080610_01388 | Not Available | Negative | 1462299 - 1463384 | 39411.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
