Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN03080610_01369 | Not Available | Positive | 1441955 - 1442197 | 8730.14 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN03080610_01370 | Not Available | Positive | 1442227 - 1443489 | 44396.7 |
| upf0755 protein | SAMN03080610_01371 | Not Available | Positive | 1443569 - 1444825 | 46096.0 |
| tigr00255 family protein | SAMN03080610_01372 | Not Available | Positive | 1444894 - 1445775 | 32280.2 |
| guanylate kinase | SAMN03080610_01373 | Not Available | Positive | 1445772 - 1446470 | 26380.3 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN03080610_01374 | Not Available | Negative | 1446440 - 1447306 | 31529.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN03080610_01375 | Not Available | Negative | 1447303 - 1448310 | 35953.9 |
| peptidyl-prolyl cis-trans isomerase sura | SAMN03080610_01376 | Not Available | Negative | 1448317 - 1449258 | 34511.2 |
| lps-assembly protein | SAMN03080610_01377 | Not Available | Negative | 1449325 - 1451760 | 90781.3 |
| lipopolysaccharide export system permease protein | SAMN03080610_01378 | Not Available | Negative | 1451757 - 1452830 | 39000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
