Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein required for colicin v production | SAMN03080610_01359 | Not Available | Negative | 1430456 - 1431079 | 22938.8 |
| dna repair protein rada/sms | SAMN03080610_01360 | Not Available | Negative | 1431135 - 1432526 | 48925.8 |
| alanine racemase | SAMN03080610_01361 | Not Available | Negative | 1432526 - 1433656 | 39295.1 |
| replicative dna helicase | SAMN03080610_01362 | Not Available | Negative | 1433692 - 1435179 | 55184.9 |
| lsu ribosomal protein l9p | SAMN03080610_01363 | Not Available | Negative | 1435408 - 1436022 | 22799.7 |
| ssu ribosomal protein s18p | SAMN03080610_01364 | Not Available | Negative | 1436103 - 1436405 | 11404.1 |
| small subunit ribosomal protein s6 | SAMN03080610_01365 | Not Available | Negative | 1436356 - 1436733 | 15035.8 |
| small conductance mechanosensitive channel | SAMN03080610_01366 | Not Available | Positive | 1437119 - 1439911 | 99361.1 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN03080610_01367 | Not Available | Positive | 1440059 - 1441012 | 32352.1 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN03080610_01368 | Not Available | Positive | 1441038 - 1441775 | 25116.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
