Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_01349 | Not Available | Negative | 1420949 - 1421323 | 13684.9 |
| s-adenosyl-l-methionine methyltransferase | SAMN03080610_01350 | Not Available | Positive | 1421491 - 1421982 | 17914.7 |
| ferritin-like metal-binding protein ycie | SAMN03080610_01351 | Not Available | Negative | 1422078 - 1422566 | 17977.3 |
| uncharacterized membrane protein | SAMN03080610_01352 | Not Available | Positive | 1422977 - 1423552 | 21250.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN03080610_01353 | Not Available | Positive | 1423617 - 1424444 | 29535.9 |
| hypothetical protein | SAMN03080610_01354 | Not Available | Positive | 1424570 - 1425415 | 29587.0 |
| pqq-like domain-containing protein | SAMN03080610_01355 | Not Available | Positive | 1425452 - 1426768 | 44662.8 |
| gtp-binding protein | SAMN03080610_01356 | Not Available | Positive | 1426790 - 1428196 | 51371.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_01357 | Not Available | Negative | 1428234 - 1428980 | 26469.9 |
| amidophosphoribosyltransferase | SAMN03080610_01358 | Not Available | Negative | 1428983 - 1430452 | 53275.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
