Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holin-like protein | SAMN03080610_01329 | Not Available | Negative | 1403657 - 1404079 | 15425.5 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01330 | Not Available | Positive | 1404171 - 1405079 | 33439.5 |
| transcriptional regulator, badm/rrf2 family | SAMN03080610_01331 | Not Available | Positive | 1405178 - 1405633 | 16522.0 |
| sulfate transport system substrate-binding protein | SAMN03080610_01332 | Not Available | Positive | 1405775 - 1406791 | 36812.8 |
| sulfate transport system permease protein | SAMN03080610_01333 | Not Available | Positive | 1406804 - 1407652 | 30156.7 |
| sulfate transport system permease protein | SAMN03080610_01334 | Not Available | Positive | 1407642 - 1408535 | 31429.2 |
| sulfate transport system atp-binding protein | SAMN03080610_01335 | Not Available | Positive | 1408543 - 1409610 | 38639.5 |
| multidrug resistance efflux pump | SAMN03080610_01336 | Not Available | Negative | 1409795 - 1410955 | 41401.0 |
| hypothetical protein | SAMN03080610_01337 | Not Available | Negative | 1410961 - 1412793 | 65110.4 |
| marr family transcriptional regulator, transcriptional regulator for hemolysin | SAMN03080610_01338 | Not Available | Negative | 1412800 - 1413246 | 16384.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
