Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose transport system atp-binding protein | SAMN03080610_01319 | Not Available | Positive | 1393009 - 1394526 | 55487.4 |
| ribose transport system permease protein | SAMN03080610_01320 | Not Available | Positive | 1394523 - 1395482 | 33235.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN03080610_01321 | Not Available | Positive | 1395497 - 1396447 | 33711.3 |
| d-tagatose-1,6-bisphosphate aldolase subunit gatz/kbaz | SAMN03080610_01322 | Not Available | Positive | 1396444 - 1397733 | 46160.1 |
| hypothetical protein | SAMN03080610_01323 | Not Available | Negative | 1397833 - 1398846 | 36036.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN03080610_01324 | Not Available | Positive | 1398981 - 1399538 | 20338.5 |
| metal dependent phosphohydrolase | SAMN03080610_01325 | Not Available | Positive | 1399546 - 1400124 | 21474.3 |
| putative dna modification/repair radical sam protein | SAMN03080610_01326 | Not Available | Positive | 1400230 - 1401441 | 45324.9 |
| dna polymerase | SAMN03080610_01327 | Not Available | Positive | 1401441 - 1402904 | 54543.6 |
| tigr00659 family protein | SAMN03080610_01328 | Not Available | Negative | 1402966 - 1403673 | 24911.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
