Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN03080610_01309 | Not Available | Positive | 1382141 - 1383706 | 55485.1 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN03080610_01310 | Not Available | Positive | 1383716 - 1385233 | 53515.2 |
| heme oxygenase | SAMN03080610_01311 | Not Available | Positive | 1385330 - 1385962 | 23343.8 |
| hypothetical protein | SAMN03080610_01312 | Not Available | Negative | 1385858 - 1386124 | 9629.17 |
| pas domain s-box-containing protein | SAMN03080610_01313 | Not Available | Positive | 1386255 - 1388729 | 88467.5 |
| response regulator receiver domain-containing protein | SAMN03080610_01314 | Not Available | Positive | 1388726 - 1389094 | 13396.2 |
| hpt domain-containing protein | SAMN03080610_01315 | Not Available | Negative | 1389120 - 1389419 | 11067.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN03080610_01316 | Not Available | Negative | 1389665 - 1390288 | 22649.0 |
| transcriptional regulator, laci family | SAMN03080610_01317 | Not Available | Negative | 1390412 - 1391449 | 38134.4 |
| ribose transport system substrate-binding protein | SAMN03080610_01318 | Not Available | Positive | 1391959 - 1392864 | 31182.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
