Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN03080610_01299 | Not Available | Positive | 1369755 - 1370594 | 30974.2 |
| hypothetical protein | SAMN03080610_01300 | Not Available | Positive | 1371156 - 1371986 | 29210.6 |
| transcriptional regulator, iclr family | SAMN03080610_01301 | Not Available | Negative | 1372002 - 1372814 | 29723.0 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN03080610_01302 | Not Available | Positive | 1372933 - 1374492 | 54023.4 |
| peptide/nickel transport system substrate-binding protein | SAMN03080610_01303 | Not Available | Positive | 1374532 - 1376142 | 59085.1 |
| peptide/nickel transport system permease protein | SAMN03080610_01304 | Not Available | Positive | 1376242 - 1377183 | 34260.1 |
| peptide/nickel transport system permease protein | SAMN03080610_01305 | Not Available | Positive | 1377185 - 1378072 | 31088.2 |
| peptide/nickel transport system atp-binding protein | SAMN03080610_01306 | Not Available | Positive | 1378074 - 1379759 | 61135.2 |
| hippurate hydrolase | SAMN03080610_01307 | Not Available | Positive | 1379756 - 1380925 | 41353.2 |
| glutamate carboxypeptidase | SAMN03080610_01308 | Not Available | Positive | 1381002 - 1382141 | 40601.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
