Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble lytic murein transglycosylase | SAMN03080610_01259 | Not Available | Negative | 1332105 - 1334549 | 88606.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN03080610_01260 | Not Available | Positive | 1334654 - 1335544 | 31847.2 |
| ssra-binding protein | SAMN03080610_01261 | Not Available | Positive | 1335568 - 1336041 | 18233.9 |
| hypothetical protein | SAMN03080610_01262 | Not Available | Negative | 1336071 - 1336430 | 12524.4 |
| uracil-dna glycosylase, family 4 | SAMN03080610_01263 | Not Available | Negative | 1336537 - 1337259 | 26008.9 |
| uncharacterized conserved protein, laba/duf88 family | SAMN03080610_01264 | Not Available | Negative | 1337256 - 1337897 | 24308.3 |
| dna-directed rna polymerase subunit omega | SAMN03080610_01265 | Not Available | Positive | 1338083 - 1338454 | 13934.1 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMN03080610_01266 | Not Available | Positive | 1338636 - 1340834 | 82106.8 |
| hypothetical protein | SAMN03080610_01267 | Not Available | Positive | 1340887 - 1341477 | 22014.2 |
| pyridoxine 5'-phosphate synthase | SAMN03080610_01268 | Not Available | Positive | 1341474 - 1342235 | 27501.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
