Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_01249 | Not Available | Negative | 1319241 - 1319774 | 19309.8 |
| high-affinity iron transporter | SAMN03080610_01250 | Not Available | Negative | 1319856 - 1321898 | 73100.1 |
| hypothetical protein | SAMN03080610_01251 | Not Available | Positive | 1322031 - 1322804 | 28675.6 |
| fur family transcriptional regulator, zinc uptake regulator | SAMN03080610_01252 | Not Available | Negative | 1322832 - 1323224 | 14428.3 |
| zinc transport system permease protein | SAMN03080610_01253 | Not Available | Negative | 1323229 - 1324056 | 28922.5 |
| zinc transport system atp-binding protein | SAMN03080610_01254 | Not Available | Negative | 1324049 - 1324888 | 30041.2 |
| zinc transport system substrate-binding protein | SAMN03080610_01255 | Not Available | Positive | 1324989 - 1326071 | 38567.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03080610_01256 | Not Available | Positive | 1326123 - 1327046 | 33735.5 |
| porin subfamily protein | SAMN03080610_01257 | Not Available | Negative | 1327541 - 1328746 | 43002.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_01258 | Not Available | Negative | 1329125 - 1331728 | 95593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
