Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN03080610_01229 | Not Available | Negative | 1296749 - 1298170 | 51657.8 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN03080610_01230 | Not Available | Negative | 1298167 - 1298886 | 27369.3 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN03080610_01231 | Not Available | Negative | 1298957 - 1300090 | 40965.6 |
| Trna-arg | Not Available | Not Available | Positive | 1300530 - 1300606 | Not Available |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN03080610_01233 | Not Available | Positive | 1300807 - 1301241 | 15848.3 |
| res domain-containing protein | SAMN03080610_01234 | Not Available | Positive | 1301241 - 1301702 | 17202.7 |
| phenylpyruvate tautomerase ppta, 4-oxalocrotonate tautomerase family | SAMN03080610_01235 | Not Available | Negative | 1301738 - 1302118 | 14702.5 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01236 | Not Available | Positive | 1302216 - 1303094 | 30982.4 |
| wg containing repeat-containing protein | SAMN03080610_01237 | Not Available | Negative | 1303159 - 1306026 | 103609.0 |
| wg containing repeat-containing protein | SAMN03080610_01238 | Not Available | Negative | 1306038 - 1308821 | 100182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
