Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | SAMN03080610_01219 | Not Available | Positive | 1287266 - 1287652 | 13987.7 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN03080610_01220 | Not Available | Positive | 1287672 - 1288151 | 16687.1 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN03080610_01221 | Not Available | Positive | 1288240 - 1289679 | 52088.6 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN03080610_01222 | Not Available | Positive | 1289679 - 1291004 | 47477.0 |
| hypothetical protein | SAMN03080610_01223 | Not Available | Positive | 1291035 - 1292273 | 42909.6 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN03080610_01224 | Not Available | Positive | 1292282 - 1292797 | 19606.9 |
| putative zn-dependent protease | SAMN03080610_01225 | Not Available | Negative | 1292847 - 1294346 | 53989.5 |
| nuclease homologue | SAMN03080610_01226 | Not Available | Negative | 1294375 - 1295226 | 30799.2 |
| hypothetical protein | SAMN03080610_01227 | Not Available | Negative | 1295175 - 1295381 | 7768.33 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN03080610_01228 | Not Available | Negative | 1295378 - 1296730 | 48326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
