Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | SAMN03080610_01169 | Not Available | Positive | 1238696 - 1240495 | 64740.4 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN03080610_01170 | Not Available | Positive | 1240634 - 1241386 | 26783.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN03080610_01171 | Not Available | Positive | 1241421 - 1242416 | 35479.4 |
| hypothetical protein | SAMN03080610_01172 | Not Available | Positive | 1242413 - 1243312 | 31591.8 |
| dna-binding transcriptional regulator, gntr family | SAMN03080610_01173 | Not Available | Positive | 1243443 - 1244087 | 24656.4 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN03080610_01174 | Not Available | Positive | 1244171 - 1244917 | 25945.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN03080610_01175 | Not Available | Positive | 1244957 - 1245799 | 30061.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03080610_01176 | Not Available | Positive | 1246012 - 1246998 | 34497.0 |
| tripartite tricarboxylate transporter tctb family protein | SAMN03080610_01177 | Not Available | Positive | 1247047 - 1247520 | 16756.5 |
| tcta family transporter | SAMN03080610_01178 | Not Available | Positive | 1247526 - 1249046 | 53652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
