Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN03080610_01159 | Not Available | Negative | 1227226 - 1228449 | 42569.2 |
| fructokinase | SAMN03080610_01160 | Not Available | Positive | 1228834 - 1229778 | 33167.3 |
| hypothetical protein | SAMN03080610_01161 | Not Available | Negative | 1229861 - 1230097 | 8842.48 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01162 | Not Available | Positive | 1230390 - 1231301 | 33235.7 |
| sorbitol/mannitol transport system substrate-binding protein | SAMN03080610_01163 | Not Available | Positive | 1231682 - 1232995 | 48124.1 |
| sorbitol/mannitol transport system permease protein | SAMN03080610_01164 | Not Available | Positive | 1233162 - 1234034 | 31633.0 |
| sorbitol/mannitol transport system permease protein | SAMN03080610_01165 | Not Available | Positive | 1234038 - 1234868 | 30603.2 |
| multiple sugar transport system atp-binding protein | SAMN03080610_01166 | Not Available | Positive | 1234952 - 1235953 | 36880.5 |
| enoyl-(acyl carrier protein) reductase | SAMN03080610_01167 | Not Available | Positive | 1235950 - 1236723 | 27343.9 |
| mannitol 2-dehydrogenase | SAMN03080610_01168 | Not Available | Positive | 1236833 - 1238422 | 58040.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
