Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN03080610_01149 | Not Available | Positive | 1212585 - 1214153 | 57304.3 |
| formate dehydrogenase subunit delta | SAMN03080610_01150 | Not Available | Negative | 1214277 - 1214504 | 8358.03 |
| fdhd protein | SAMN03080610_01151 | Not Available | Negative | 1214494 - 1215333 | 29173.3 |
| formate dehydrogenase major subunit | SAMN03080610_01152 | Not Available | Negative | 1215344 - 1218223 | 104934.0 |
| formate dehydrogenase iron-sulfur subunit | SAMN03080610_01153 | Not Available | Negative | 1218242 - 1219804 | 55448.7 |
| formate dehydrogenase subunit gamma | SAMN03080610_01154 | Not Available | Negative | 1219801 - 1220280 | 16925.2 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_01155 | Not Available | Negative | 1220402 - 1221313 | 33563.5 |
| major facilitator superfamily protein | SAMN03080610_01156 | Not Available | Negative | 1221497 - 1223227 | 62023.2 |
| hamp domain-containing protein | SAMN03080610_01157 | Not Available | Negative | 1223552 - 1225612 | 74227.2 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN03080610_01158 | Not Available | Negative | 1225628 - 1227046 | 52025.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
