Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | SAMN03080610_01109 | Not Available | Negative | 1177256 - 1177918 | 24056.4 |
| cytochrome c556 | SAMN03080610_01110 | Not Available | Negative | 1178013 - 1178468 | 16050.2 |
| chemotaxis protein chez | SAMN03080610_01111 | Not Available | Negative | 1178809 - 1179495 | 25322.4 |
| two-component system, chemotaxis family, response regulator chey | SAMN03080610_01112 | Not Available | Positive | 1179668 - 1180051 | 14330.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN03080610_01113 | Not Available | Positive | 1180693 - 1181361 | 25331.3 |
| winged helix dna-binding domain-containing protein | SAMN03080610_01114 | Not Available | Negative | 1181551 - 1182354 | 29453.6 |
| hypothetical protein | SAMN03080610_01115 | Not Available | Negative | 1182409 - 1182585 | 6199.35 |
| response regulator receiver domain-containing protein | SAMN03080610_01116 | Not Available | Negative | 1182695 - 1183120 | 15643.1 |
| signal transduction histidine kinase regulating c4-dicarboxylate transport system | SAMN03080610_01117 | Not Available | Negative | 1183120 - 1184868 | 64025.8 |
| hypothetical protein | SAMN03080610_01118 | Not Available | Negative | 1184858 - 1185343 | 17725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
