Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hook-length control protein flik | SAMN03080610_01079 | Not Available | Positive | 1139384 - 1141015 | 55553.5 |
| transglycosylase slt domain-containing protein | SAMN03080610_01080 | Not Available | Positive | 1140966 - 1141598 | 22149.7 |
| type ii secretory pathway, component exea (predicted atpase) | SAMN03080610_01081 | Not Available | Negative | 1141752 - 1145438 | 137290.0 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_01082 | Not Available | Positive | 1146109 - 1148736 | 96880.9 |
| hypothetical protein | SAMN03080610_01083 | Not Available | Negative | 1148864 - 1149826 | 35559.1 |
| putative acetyltransferase | SAMN03080610_01084 | Not Available | Negative | 1150594 - 1151043 | 16760.0 |
| arac family transcriptional regulator | SAMN03080610_01085 | Not Available | Negative | 1151221 - 1152051 | 31198.1 |
| threonine dehydratase | SAMN03080610_01086 | Not Available | Positive | 1152174 - 1153145 | 33738.5 |
| ankyrin repeat | SAMN03080610_01087 | Not Available | Negative | 1153363 - 1155447 | 77139.2 |
| hypothetical protein | SAMN03080610_01088 | Not Available | Positive | 1155779 - 1156600 | 29882.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
