Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate transport system substrate-binding protein | SAMN03080610_01019 | Not Available | Positive | 1077291 - 1078298 | 36893.5 |
| phosphonate transport system permease protein | SAMN03080610_01020 | Not Available | Positive | 1078362 - 1079171 | 29316.2 |
| putative phosphonate metabolism protein | SAMN03080610_01021 | Not Available | Positive | 1079195 - 1079902 | 26265.0 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN03080610_01022 | Not Available | Positive | 1079899 - 1081038 | 40873.2 |
| ribose 1,5-bisphosphokinase | SAMN03080610_01023 | Not Available | Positive | 1081035 - 1081619 | 21078.1 |
| iron(iii) transport system substrate-binding protein | SAMN03080610_01024 | Not Available | Positive | 1081690 - 1082679 | 35117.4 |
| iron(iii) transport system permease protein | SAMN03080610_01025 | Not Available | Positive | 1082627 - 1084408 | 62589.7 |
| iron(iii) transport system atp-binding protein | SAMN03080610_01026 | Not Available | Positive | 1084396 - 1085448 | 37339.2 |
| metallo-beta-lactamase superfamily protein | SAMN03080610_01027 | Not Available | Positive | 1085448 - 1086530 | 38261.3 |
| abc-2 type transport system permease protein | SAMN03080610_01028 | Not Available | Negative | 1086534 - 1087655 | 40800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
